Protocols

Following presentation slides can be found in dropbox

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Presentations

Shiny Apps


Single Cell Data Viewer

This application is an R Shiny website for viewing single cell RNA-Seq data analysed using Seurat. It can read in the expression data, sample data, feature annotation, dimensionality reduction/ clustering, and marker gene information as an RDS object and enables users to vizualize and interact with their single cell RNAseq data



Ligand-receptor pairs overlap

This application is an R Shiny website for reading lists of LR pairs and finding overlaps between them.



Reference Mapping

This application is an R Shiny website for mapping single cell data to Reference data


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Datasets